In Blackmoon Prophecy, Godot helps Vahn after he wakes up after the merger of the worlds and assist him in the struggle against Malacore.
In Blackmoon Prophecy II, Godot remains separate from the rising hostilities with Esperkind and serves as an advisor to Regent Handel of Lindblum.
Between Blackmoon Prophecy and Blackmoon Prophecy II
A year after the defeat of Zeul, Godot ventures to Lindblum where he becomes Regent Gran's closest advisor. With his help, Regent rebuilts the shattered kingdom. Esperkind learns of Godot's deeds in Lindblum and many of them come and lend their support.